Diet analysis by next-generation sequencing indicates the frequent consumption of introduced plants by the critically endangered red-headed wood pigeon Columba janthina nitens in oceanic island habitats. Pearson, C. The effects of pastoral intensification on the feeding interactions of generalist predators in streams. Bell, K. Pollen DNA barcoding: current applications and future prospects.
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Genome 59 , — Lucas, A. Floral resource partitioning by individuals within generalised hoverfly pollination networks revealed by DNA metabarcoding. Heleno, R.
B , Lim, V. Impact of urbanisation and agriculture on the diet of fruit bats. Urban Ecosyst. Pernetta, A. Acta Oecologica-International J. Clare, E. Molecular detection of trophic interactions: emerging trends, distinct advantages, significant considerations and conservation applications. Soorae, P. Griffiths, C. King, R. Molecular analysis of predation: a review of best practice for DNA-based approaches. Soininen, E. Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures.
Pumarino, L. Leal, M. Coral feeding on microalgae assessed with molecular trophic markers. Wallinger, C. The effect of plant identity and the level of plant decay on molecular gut content analysis in a herbivorous soil insect. Pompanon, F.
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Who is eating what: Diet assessment using next generation sequencing. Hebert, P. Biological identifications through DNA barcodes. B Biol. Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. The promise of DNA barcoding for taxonomy. Taberlet, P. Nucleic Acids Res. DNA barcode for land plants. USA , — Hollingsworth, P.
Choosing and using a plant DNA barcode. PLoS One 6 , e Little, D. Jurado-Rivera, J. DNA barcoding insect-host plant associations. Valentini, A. New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: The trnL approach. New insights on diet variability revealed by DNA barcoding and high-throughput pyrosequencing: Chamois diet in autumn as a case study. Ait Baamrane, M.
PLoS One 7 , e Coghlan, M. Metabarcoding avian diets at airports: implications for birdstrike hazard management planning. Hibert, F. The Tapir as a Case Study. PLoS One 8 , e Kanz, C. The EMBL nucleotide sequence database. Gebremedhin, B. DNA metabarcoding reveals diet overlap between the endangered walia ibex and domestic goats - Implications for conservation.
PLoS One 11 , e Kartzinel, T. DNA metabarcoding illuminates dietary niche partitioning by African large herbivores. Chen, S. PLoS One 5 , 1—8 Refining the DNA barcode for land plants. Comparative analysis of a large dataset indicates that internal transcribed spacer ITS should be incorporated into the core barcode for seed plants.
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Cheng, T. Moorhouse-Gann, R. Ecological replacement as a restoration tool: Disentangling the impacts and interactions of Aldabra giant tortoises Aldabrachelys gigantea using DNA metabarcoding. PhD thesis Cardiff University, Dunn, J. The decline of the Turtle Dove: dietary associations with body condition and competition with other columbids analysed using next generation sequencing.
Ankenbrand, M. Coleman, A. ITS2 is a double-edged tool for eukaryote evolutionary comparisons. Trends Genet.
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Genotyping errors: causes, consequences and solutions. Yang, Y. Using DNA metabarcoding to investigate honey bee foraging reveals limited flower use despite high floral availability. Hawkins, J.
Using DNA metabarcoding to identify the floral composition of honey: A new tool for investigating honey bee foraging preferences. PLoS One 10 , 1—20 Iwanowicz, D. Metabarcoding of fecal samples to determine herbivore diets: A case study of the endangered Pacific pocket mouse.
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Hall, T. Larkin, M. ClustalW and ClustalX version 2. Bioinformatics 23 , — Bates, D. Over the years, we received numerous inquiries from scientists regarding the quality of their Sanger sequencing data close to the primer. It generally takes about 65 min to complete a run with POP-7 polymer, but it will take about min with POP-6 polymer. There is one solution.
For researchers performing NGS confirmation , these protocols may improve the overall quality of your data across the read while reducing bioinformatics requirements of data trimming. Thus, depending upon your application, the workflow and consumables can make a big difference. Allows you to work through diagnoses with hundreds of differentials for board certification preparation. Clarifies the impact of the latest disease entities on the interpretation of radiologic findings. Strana 7. Strana Obsah 1 Chest Imaging.